BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015C05SP1|AL426815
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig912 1692 0.0
>3x_Contig912
Length = 2436
Score = 1692 bits (853), Expect = 0.0
Identities = 910/929 (97%)
Strand = Plus / Minus
Query: 1 gatcatcaatgttaaaattgtgttaccacctaatctcttgacttttcttgtcttcctgtt 60
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 2197 gatcatcaatgttaaaattgtgttaggaggtaatctcttgacttttcttgtcttcctgtt 2138
Query: 61 catacttgtgctttcccagataacgtcatctggtccgtaaccaattaaagcgctgtcgta 120
||| ||||| ||| |||||| || || |||| |||| |||||||||||||||||||
Sbjct: 2137 gatagttgtggtttgggagataaggtgatgtggtgggtaagcaattaaagcgctgtcgta 2078
Query: 121 gatatctttatcgaacaaatatgggattgattgataagctctttgcgcatcgtattgagt 180
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2077 gatatgtttatcgaagaaatatgggattgattgataagctctttgcgcatcgtattgagt 2018
Query: 181 cttgaattcgataaatgccgatcctacggtgttattatcttcccagctttcctgctctgt 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2017 cttgaattcgataaatgccgatgctacggtgttattatcttcccagctttcctgctctgt 1958
Query: 241 accaattttttcattcaactcactgatatgtttcacagagtagtccaatgtgtcaacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 accaattttttcattcaactcactgatatgtttcacagagtagtccaatgtgtcaacctt 1898
Query: 301 ctcactcaaacaaatatttaatataggaatcttggataacctgtgctttggtcttttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 ctcactcaaacaaatatttaatataggaatcttggataacctgtgctttggtcttttctt 1838
Query: 361 cagtggaatgtaagtttccaaatcattttgaggttgatccaaattagtggttccctctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1837 cagtggaatgtaagtttccaaatcattttgaggttgatccaaattagtggttccctctgc 1778
Query: 421 taccttttcaccctttttatcagcttttaatttcttcttaaccgatttggtgatgactcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1777 taccttttcaccctttttatcagcttttaatttcttcttaaccgatttggtgatgactcc 1718
Query: 481 gtttagtgtagattcatatttgttggcgagttgagcacgctccttaaccaattcatgcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 gtttagtgtagattcatatttgttggcgagttgagcacgctccttaaccaattcatgcaa 1658
Query: 541 ggtactcaaatcacgagcaaggaaaacttgtgatacattcaaaaatctttcgttcaactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 ggtactcaaatcacgagcaaggaaaacttgtgatacattcaaaaatctttcgttcaactc 1598
Query: 601 cggttcagagcaaaaatcgccctgcaagtcggtcaaaattatacttctagaagagagtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 cggttcagagcaaaaatcgccctgcaagtcggtcaaaattatacttctagaagagagtaa 1538
Query: 661 cccatcgtacaatggagaagtctgaatggaatgacgaagcgtaacgtaatagtataattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 cccatcgtacaatggagaagtctgaatggaatgacgaagcgtaacgtaatagtataattc 1478
Query: 721 tctgtagatgataaagatgattagaccaaagaagatccaagacaaaaatacatgtgcaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 tctgtagatgataaagatgattagaccaaagaagatccaagacaaaaatacatgtgcaaa 1418
Query: 781 gaatctattcttgttgctaacgttcgaaaaagcaagcaattcaaacccttctagattgta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gaatctattcttgttgctaacgttcgaaaaagcaagcaattcaaacccttctagattgta 1358
Query: 841 accattggtagcattgaccggcaataaaattgggaaaagtataaagcaaccgattaatga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 accattggtagcattgaccggcaataaaattgggaaaagtataaagcaaccgattaatga 1298
Query: 901 gatacctccaaaaatggagatgtaacgca 929
|||||||||||||||||||||||||||||
Sbjct: 1297 gatacctccaaaaatggagatgtaacgca 1269
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7765
Number of Sequences: 1807
Number of extensions: 7765
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)